The detailed information of tRNA gene sequence


Sequence ID>C10104863
Genome IDCP001940
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfurivibrio alkaliphilus AHT 2 [CP001940]
Start position on genome 2385705
End posion on genome 2385802
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cggccattgc
tRNA gene sequence 
GGAAGTGGAAAGGGCACTGGTGGCCCTCCCGGACTTCAAATCCGGTGCACCGGGTTAACA
GCCTGGTGGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
tttttttgtc
Secondary structure (Cloverleaf model)
>C10104863	SeC	TCA
                   c      GCCA tttttttgtc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      C A C        A      + | | | |     G
    T       G G G A       G T G G G     C
    G       | | | |                 T T
    G       C C C T
      T G G        C     TGCACCGGGTTAACAGCCTGGTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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