The detailed information of tRNA gene sequence


Sequence ID>C10105390
Genome IDCP001734
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfohalobium retbaense DSM 5692 [CP001734]
Start position on genome 1991273
End posion on genome 1991366
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggacgtggtg
tRNA gene sequence 
GGAAGCGTTTCGTCACCGGTGTGGCGCCTGGACTTCAAATCCAGTGGGCGGCTGCCAAGT
CGCCGGTAGGTTCGACTCCTATACGCTTCCGCCA
Downstream region at tRNA end position 
ttcccccctt
Secondary structure (Cloverleaf model)
>C10105390	SeC	TCA
                   g      GCCA ttcccccctt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    T     T A T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G T A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          C     TGGGCGGCTGCCAAGTCGCCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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