The detailed information of tRNA gene sequence


Sequence ID>C10105409
Genome IDCP001734
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfohalobium retbaense DSM 5692 [CP001734]
Start position on genome 2209164
End posion on genome 2209072
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tccttcttgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTTGGCTGAAGGCGCTCGCCTGCTAAGCGAGTAACGGGTTAACCCC
CGTTCGAGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tatttgctca
Secondary structure (Cloverleaf model)
>C10105409	Ser	GCT
                   c      GCCA tatttgctca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     A
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TAACGGGTTAACCCCCGTTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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