The detailed information of tRNA gene sequence


Sequence ID>C10107648
Genome IDCP001804
Search identical group
Phylum/ClassMyxococcota
SpeciesHaliangium ochraceum DSM 14365 [CP001804]
Start position on genome 182079
End posion on genome 182153
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ctcagcatca
tRNA gene sequence 
GACCCCATCGTCTAGCTGGCCTAGGACACCGGCCTTTCACGCCGGCGACACGGGTTCAAA
TCCCGTTGGGGTCGCtc
Downstream region at tRNA end position 
tcgaaaacgc
Secondary structure (Cloverleaf model)
>C10107648	Glu	TTC
                   a      GCtc tcgaaaacgc
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
    T C G A        C      | | | | |     A
  G         T C T G       A C G G G     C
  G         + | | |                 T T
  C         G G A C
    C T A          A     CGAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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