The detailed information of tRNA gene sequence


Sequence ID>C10107649
Genome IDCP001804
Search identical group
Phylum/ClassMyxococcota
SpeciesHaliangium ochraceum DSM 14365 [CP001804]
Start position on genome 202428
End posion on genome 202504
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgccctcttc
tRNA gene sequence 
GGCGAGGTAGCTCAGTCGGTTAGAGCGGGGGTTTCATAAGCCCTAGGTCGACGGTTCAAG
TCCGTCTCTCGCCACCA
Downstream region at tRNA end position 
tcactttatc
Secondary structure (Cloverleaf model)
>C10107649	Met	CAT
                   c      ACCA tcactttatc
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          T G
                    T     C T G C C     A
      T G A        A      | | | | |     A
    C       C T C G       G A C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    T + G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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