The detailed information of tRNA gene sequence


Sequence ID>C10107657
Genome IDCP001804
Search identical group
Phylum/ClassMyxococcota
SpeciesHaliangium ochraceum DSM 14365 [CP001804]
Start position on genome 5310935
End posion on genome 5311009
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cagattcttc
tRNA gene sequence 
GGCCCCATGGTCTAGCGGTTAGGACGTCGGCCTCTCACGCCGAAATCCGGGGTTCAAGTC
CCCGTGGGGTCACCA
Downstream region at tRNA end position 
gcgaaacgcc
Secondary structure (Cloverleaf model)
>C10107657	Glu	CTC
                   c      ACCA gcgaaacgcc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G C C C C     A
      C G A        G      | | | | |     A
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AATC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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