The detailed information of tRNA gene sequence


Sequence ID>C10107667
Genome IDCP001804
Search identical group
Phylum/ClassMyxococcota
SpeciesHaliangium ochraceum DSM 14365 [CP001804]
Start position on genome 9408547
End posion on genome 9408462
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgggcatccc
tRNA gene sequence 
GGGGGAGTGGCCGAGTGGTCGAAGGCAGCGGTCTTGAAAACCGCCGAGTGAAAGCTCCGG
GGGTTCGAATCCCTCCTCCTCCGCCA
Downstream region at tRNA end position 
ggctgtgaaa
Secondary structure (Cloverleaf model)
>C10107667	Ser	TGA
                   c      GCCA ggctgtgaaa
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     CGAGTGAAAGCTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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