The detailed information of tRNA gene sequence


Sequence ID>C10107668
Genome IDCP001804
Search identical group
Phylum/ClassMyxococcota
SpeciesHaliangium ochraceum DSM 14365 [CP001804]
Start position on genome 9408388
End posion on genome 9408295
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caagcatcct
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGCTGAAGGCACCGGTTTGCTAAACCGGCGAGTGGGTATAAACC
TGCTCCGAGGGTTCGAATCCCTCCCTCTCCGCCG
Downstream region at tRNA end position 
aaggaacggc
Secondary structure (Cloverleaf model)
>C10107668	Ser	GCT
                   t      GCCG aaggaacggc
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CGAGTGGGTATAAACCTGCTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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