The detailed information of tRNA gene sequence


Sequence ID>C10107671
Genome IDCP001804
Search identical group
Phylum/ClassMyxococcota
SpeciesHaliangium ochraceum DSM 14365 [CP001804]
Start position on genome 9407227
End posion on genome 9407140
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcaaacctct
tRNA gene sequence 
GGAGAGGTGACCGAGTGGCCGAAGGTGCACGATTGGAAATCGTGTGTATCGCAAGGTACC
GGGGGTTCGAATCCCCCCCTCTCCGCCA
Downstream region at tRNA end position 
tttctcctca
Secondary structure (Cloverleaf model)
>C10107671	Ser	GGA
                   t      GCCA tttctcctca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G G G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTATCGCAAGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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