The detailed information of tRNA gene sequence


Sequence ID>C10107679
Genome IDCP001804
Search identical group
Phylum/ClassMyxococcota
SpeciesHaliangium ochraceum DSM 14365 [CP001804]
Start position on genome 5524246
End posion on genome 5524173
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tcgtgatttt
tRNA gene sequence 
GCTGGTGTAGCTCAGTTGGTAGAGCACCTGATTTGTAATCAGGGGGCCGCGGGTTCGAGT
CCCACCGCCAGCTCtg
Downstream region at tRNA end position 
ctcctcgact
Secondary structure (Cloverleaf model)
>C10107679	Thr	TGT
                   t      TCtg ctcctcgact
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     C A C C C     A
      T G A        A      |   | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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