The detailed information of tRNA gene sequence


Sequence ID>C10107689
Genome IDCP001804
Search identical group
Phylum/ClassMyxococcota
SpeciesHaliangium ochraceum DSM 14365 [CP001804]
Start position on genome 3371232
End posion on genome 3371156
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaggtcacac
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCGGCCGGCTCATAACCGGCTGGTCCCTGGTTCAAG
CCCAGGTGGGCCCACCC
Downstream region at tRNA end position 
attgaaaacc
Secondary structure (Cloverleaf model)
>C10107689	Met	CAT
                   c      ACCC attgaaaacc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          C G
                    T     G G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     TGGTC
                    G - C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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