The detailed information of tRNA gene sequence


Sequence ID>C10107801
Genome IDCP002039
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesHerbaspirillum seropedicae SmR1 [CP002039]
Start position on genome 2171862
End posion on genome 2171951
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gaagttaacc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGTACCTGACTCGAAATCAGGCGTACGGTTTCCCGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gttggctcac
Secondary structure (Cloverleaf model)
>C10107801	Ser	CGA
                   c      GCCA gttggctcac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G         | | +                 T T
    T       A T G T
      C G A        A     CGTACGGTTTCCCGTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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