The detailed information of tRNA gene sequence


Sequence ID>C10107828
Genome IDCP002039
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesHerbaspirillum seropedicae SmR1 [CP002039]
Start position on genome 3614033
End posion on genome 3613958
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cctcaattga
tRNA gene sequence 
TCCCTGATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGTCCCTGGTTCGAGT
CCAGGTCGGGGAGCCA
Downstream region at tRNA end position 
gaatacgaaa
Secondary structure (Cloverleaf model)
>C10107828	Asn	GTT
                   a      GCCA gaatacgaaa
                     T - A
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C
                     A - T          T G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    C       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A   C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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