The detailed information of tRNA gene sequence


Sequence ID>C10107832
Genome IDCP002039
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesHerbaspirillum seropedicae SmR1 [CP002039]
Start position on genome 3533735
End posion on genome 3533660
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tgaccgtttt
tRNA gene sequence 
GTCCCCTTCGTCTAGAGGCCTAGGACATCACCCTTTCACGGTGAGTACGGGGGTTCGAAT
CCCCCAGGGGACGCCA
Downstream region at tRNA end position 
aataaaaaag
Secondary structure (Cloverleaf model)
>C10107832	Glu	TTC
                   t      GCCA aataaaaaag
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       G G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     GTAC
                    T - A
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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