The detailed information of tRNA gene sequence


Sequence ID>C10109542
Genome IDCP001743
Search identical group
Phylum/ClassDeinococcota
SpeciesMeiothermus ruber DSM 1279 [CP001743]
Start position on genome 1564141
End posion on genome 1564217
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctgcaaccat
tRNA gene sequence 
GGCTATGTAGCTCAGCTGGTTAGAGCACACGACTCATAATCGTGGTGTCGGCGGTTCAAG
TCCGCCCATAGCCACCA
Downstream region at tRNA end position 
gtccaggacg
Secondary structure (Cloverleaf model)
>C10109542	Met	CAT
                   t      ACCA gtccaggacg
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     T - A
                     G - C          T G
                    T     C C G C C     A
      C G A        A      | | | | |     A
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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