The detailed information of tRNA gene sequence


Sequence ID>C10109597
Genome IDCP002042
Search identical group
Phylum/ClassDeinococcota
SpeciesAllomeiothermus silvanus DSM 9946 [CP002042]
Start position on genome 2227237
End posion on genome 2227328
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tggaacgcgc
tRNA gene sequence 
GGAGAGGTGCCCGAGTGGTTGAAGGGGCACGCCTGGAGAGCGTGTATAGGGCGTTCGCTC
TATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gaagacgcaa
Secondary structure (Cloverleaf model)
>C10109597	Ser	GGA
                   c      GCCA gaagacgcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    T       A G G G
      T G A        G     TATAGGGCGTTCGCTCTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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