The detailed information of tRNA gene sequence


Sequence ID>C10109611
Genome IDCP002042
Search identical group
Phylum/ClassDeinococcota
SpeciesAllomeiothermus silvanus DSM 9946 [CP002042]
Start position on genome 1493502
End posion on genome 1493426
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gggggcgcga
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGAAGGTTCAAA
TCCTTCCCCCGCAACCA
Downstream region at tRNA end position 
gcgaaggggg
Secondary structure (Cloverleaf model)
>C10109611	Met	CAT
                   a      ACCA gcgaaggggg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G A A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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