The detailed information of tRNA gene sequence


Sequence ID>C10109612
Genome IDCP002042
Search identical group
Phylum/ClassDeinococcota
SpeciesAllomeiothermus silvanus DSM 9946 [CP002042]
Start position on genome 1401836
End posion on genome 1401760
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tctggtgcgt
tRNA gene sequence 
GGGCCGTTAGCTCAGCTGGTCAGAGCGGGGGACTCATAATCTCTTGGTCGCAGGTTCAAG
TCCTGCACGGCCCACCA
Downstream region at tRNA end position 
agcctaagtc
Secondary structure (Cloverleaf model)
>C10109612	Met	CAT
                   t      ACCA agcctaagtc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     C G T C C     A
      C G A        A      | | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     TGGTC
                    G + T
                    G - C
                    G + T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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