The detailed information of tRNA gene sequence


Sequence ID>C10109647
Genome IDFP565575
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Methylomirabilis oxyfera [FP565575]
Start position on genome 1919350
End posion on genome 1919256
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
agattatgct
tRNA gene sequence 
GGAGGCGGAATGGGCCCGGTGGCCCTCCTGGTCTTCAAAACCAGCGCACCCGCTAATACC
GGGTTGGTGGGTTCGACCCCCACACGCCTCCGCCA
Downstream region at tRNA end position 
ccatcctgct
Secondary structure (Cloverleaf model)
>C10109647	SeC	TCA
                   t      GCCA ccatcctgct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     G   A          C C
                    A     C A C C C     A
      C C C        A      | | | | |     G
    G       G G G T       G T G G G     C
    G       | | |                   T T
    T       C C C T
      G G          C     CGCACCCGCTAATACCGGGTTG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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