The detailed information of tRNA gene sequence


Sequence ID>C10109689
Genome IDCP002040
Search identical group
Phylum/ClassActinomycetota
SpeciesNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 [CP002040, CP002041]
Start position on genome 5712496
End posion on genome 5712581
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agttgttcgc
tRNA gene sequence 
GGAGGATTCGCCTAGTGGCCTAGGGCGCACGCTTGGAAAGCGTGTTGGTGGCAACGCCTC
AGGGGTTCGAATCCCCTATCCTCCGCgg
Downstream region at tRNA end position 
cggctagcag
Secondary structure (Cloverleaf model)
>C10109689	Ser	GGA
                   c      GCgg cggctagcag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C C G       A G G G G     C
    G       + | | |                 T T
    C       G G G C
      C T A        G     TTGGTGGCAACGCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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