The detailed information of tRNA gene sequence


Sequence ID>C10109725
Genome IDFP929003
Search identical group
Phylum/ClassNitrospirota
SpeciesNitrospira defluvii [FP929003]
Start position on genome 1253847
End posion on genome 1253921
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttccggctgg
tRNA gene sequence 
AGGGGCATGGTGTCAACGGCAGCACATCGGTCTCCAAAACCGAGAGTCTAGGTTCAAATC
CTAGTGCCCCTGCCA
Downstream region at tRNA end position 
agcccttgtg
Secondary structure (Cloverleaf model)
>C10109725	Trp	CCA
                   g      GCCA agcccttgtg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G A T C C     A
      A A C        G      | | | | |     A
    C       T G T G       C T A G G     C
    G       + | | |                 T T
    G       G C A C
      C A          A     GAGT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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