The detailed information of tRNA gene sequence


Sequence ID>C10110176
Genome IDCP001744
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPlanctopirus limnophila DSM 3776 [CP001744]
Start position on genome 4157911
End posion on genome 4158000
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgccgatgct
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGATAGCACCGCTTTGCTAAAGCGGCGTGGGAGTCAAATCC
TACCGCGGGTTCGAATCCCGCCCTCTCCGCtt
Downstream region at tRNA end position 
gccgcaaagc
Secondary structure (Cloverleaf model)
>C10110176	Ser	GCT
                   t      GCtt gccgcaaagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G C G G G     C
    G       + | | |                 T T
    T       T A G C
      C G A        A     CGTGGGAGTCAAATCCTACC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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