The detailed information of tRNA gene sequence


Sequence ID>C10110178
Genome IDCP001744
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPlanctopirus limnophila DSM 3776 [CP001744]
Start position on genome 4453899
End posion on genome 4453973
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcaacattga
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGCGAGGCTCATAACCTCGAGGTCGTAGGTTCAAA
TCCTGCCCCCGCCACtt
Downstream region at tRNA end position 
gaaaagcccg
Secondary structure (Cloverleaf model)
>C10110178	Met	CAT
                   a      ACtt gaaaagcccg
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | + | | |     A
    C       C G A G       G T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    G - C
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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