The detailed information of tRNA gene sequence


Sequence ID>C10110180
Genome IDCP001744
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPlanctopirus limnophila DSM 3776 [CP001744]
Start position on genome 5398157
End posion on genome 5398082
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcgagatctT
tRNA gene sequence 
GGCGATGTAGCTCAGTCGGTTAGAGCAGCGGCTTCATAAGCCGTGTGTCGTGGGTTCGAG
TCCCTCCATCGCCATtg
Downstream region at tRNA end position 
gagttttttg
Secondary structure (Cloverleaf model)
>C10110180	Met	CAT
                   T      ATtg gagttttttg
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T G A        A      |   | | |     G
    C       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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