The detailed information of tRNA gene sequence


Sequence ID>C10110448
Genome IDCP001848
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPirellula staleyi DSM 6068 [CP001848]
Start position on genome 3555251
End posion on genome 3555338
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aagctaagcc
tRNA gene sequence 
GGATGGGTGGCCGAGTGGTTTAAGGCAGCAGTCTTGAAAACTGCCGTAGTCGAAAGGCTA
CCGGGGGTTCGAATCCCTCCCCATCCGCtg
Downstream region at tRNA end position 
ggtatgtcgc
Secondary structure (Cloverleaf model)
>C10110448	Ser	TGA
                   c      GCtg ggtatgtcgc
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGTAGTCGAAAGGCTACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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