The detailed information of tRNA gene sequence


Sequence ID>C10110667
Genome IDCP001807
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermus marinus DSM 4252 [CP001807]
Start position on genome 2619531
End posion on genome 2619607
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaggcgtct
tRNA gene sequence 
GGCGCGGTAGCTCAGTCGGTTAGAGCGTCGGATTCATAACCCGGAGGTCGAGGGTTCGAA
TCCCTCCCGCGCCACTA
Downstream region at tRNA end position 
cgaaaaaaag
Secondary structure (Cloverleaf model)
>C10110667	Met	CAT
                   t      ACTA cgaaaaaaag
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    C       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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