The detailed information of tRNA gene sequence


Sequence ID>C10110681
Genome IDCP001807
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermus marinus DSM 4252 [CP001807]
Start position on genome 1174690
End posion on genome 1174614
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tcctgcaagt
tRNA gene sequence 
GGTCCGGTAGTTCAGTTGGTTAGAACGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCCGGACCGCCA
Downstream region at tRNA end position 
catgccctgc
Secondary structure (Cloverleaf model)
>C10110681	Asp	GTC
                   t      GCCA catgccctgc
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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