The detailed information of tRNA gene sequence


Sequence ID>C10110741
Genome IDCP001096
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhodopseudomonas palustris TIE-1 [CP001096]
Start position on genome 716008
End posion on genome 716084
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcagagcttc
tRNA gene sequence 
GGCGGGGAAGAGCAGCCCGGTCGCTCGCCTGGCTCATAACCAGGAGGTCCGCGGTTCAAA
TCCGCGCCCCGCAACCA
Downstream region at tRNA end position 
atccagcccg
Secondary structure (Cloverleaf model)
>C10110741	Met	CAT
                   c      ACCA atccagcccg
                     G   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    A     G C G C C     A
      C G A        A      | | | | |     A
    C       C G A G       C G C G G     C
    C       | | | |                 T T
    G       G C T C
      G T C        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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