The detailed information of tRNA gene sequence


Sequence ID>C10111877
Genome IDCP001965
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesSideroxydans lithotrophicus ES-1 [CP001965]
Start position on genome 2324512
End posion on genome 2324423
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcgggtaaat
tRNA gene sequence 
GGAGGTGTGGCCGAGCGGTTGAAGGCACTAGTCTTGAAAACTAGCGAGGATGAAAGTCCT
CCGTGAGTTCGAATCTCACCGCCTCCGCCA
Downstream region at tRNA end position 
aattcgaatc
Secondary structure (Cloverleaf model)
>C10111877	Ser	TGA
                   t      GCCA aattcgaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     CGAGGATGAAAGTCCTCC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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