The detailed information of tRNA gene sequence


Sequence ID>W1510403959
Genome IDCOCK01000040
Search identical group
Phylum/ClassFirmicutes
SpeciesStreptococcus pneumoniae CH2106 [COCK] CH2106 [COCK]
Start position on genome 186
End posion on genome 275
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cccattaatT
tRNA gene sequence 
GGAGAATTACTCAAGAGGCTGAAGAGGACGGTTTGCTAAATCGTTAGGTCGGGTAACTGG
CGCAAGGGTTCGAATCCCTTATTCTCCGTtt
Downstream region at tRNA end position 
taatgagagt
Secondary structure (Cloverleaf model)
>W1510403959	Ser	GCT
                   T      GTtt taatgagagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     T - A          T A
                    T     T T C C C     A
      A G A        A      | | | | |     G
    G       A C T C       A A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGGGTAACTGGCGC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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