The detailed information of tRNA gene sequence


Sequence ID>C10112138
Genome IDCP001778
Search identical group
Phylum/ClassActinomycetota
SpeciesStackebrandtia nassauensis DSM 44728 [CP001778]
Start position on genome 177616
End posion on genome 177691
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccatcagcgg
tRNA gene sequence 
AGGGGTGTGGCGCAATTGGAAGCGCAACGGTCTCCAAAACCGTAGGTTGCAGGTTCGAGT
CCTGTCACCCCTGCAA
Downstream region at tRNA end position 
atatcgaaaa
Secondary structure (Cloverleaf model)
>C10112138	Trp	CCA
                   g      GCAA atatcgaaaa
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T G T C C     A
      T A A        G      + | | | |     G
    T       C G C G       G C A G G     C
    G       | | | |                 T T
    G       G C G C
      A A          A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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