The detailed information of tRNA gene sequence


Sequence ID>C10112180
Genome IDCP001778
Search identical group
Phylum/ClassActinomycetota
SpeciesStackebrandtia nassauensis DSM 44728 [CP001778]
Start position on genome 89547
End posion on genome 89458
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gctcttccgc
tRNA gene sequence 
GGTGACGTGTCCGAGCGGCCGAAGGAGAACGCCTCGAAAGCGTTTGATGGTTTACGCCAT
CCGTGGGTTCAAATCCCACCGTCACCGCCA
Downstream region at tRNA end position 
cggataaaca
Secondary structure (Cloverleaf model)
>C10112180	Ser	CGA
                   c      GCCA cggataaaca
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G T G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TGATGGTTTACGCCATCC
                    A - T
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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