The detailed information of tRNA gene sequence


Sequence ID>C10112197
Genome IDCP002026
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAncylobacter novellus DSM 506 [CP002026]
Start position on genome 3699349
End posion on genome 3699444
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aattagctct
tRNA gene sequence 
GGAAGAGCGTCTCATCCGGTGATGGGACCGGACTTCAAATCCGGGAGGGGCCGCGAGCCG
GTCCTTGGTGGGTTCGACTCCCACTCTCTTCCGCCA
Downstream region at tRNA end position 
tccccttctc
Secondary structure (Cloverleaf model)
>C10112197	SeC	TCA
                   t      GCCA tccccttctc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     C   T          T C
                    G     C A C C C     A
      C C T        T      | | | | |     G
    G       A C T C       G T G G G     C
    G       | | + |                 T T
    T       T G G G
      G A          A     GAGGGGCCGCGAGCCGGTCCTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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