The detailed information of tRNA gene sequence


Sequence ID>C10112572
Genome IDCP002116
Search identical group
Phylum/ClassSpirochaetota
SpeciesSediminispirochaeta smaragdinae DSM 11293 [CP002116]
Start position on genome 1643748
End posion on genome 1643821
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gacatgttgc
tRNA gene sequence 
GGGGGCATAGCTCAGCTGGCTAGAGCATCGGCTTTGCAAGCCGAGGGTCTGGGGTTCGAA
TCCCCATGCCTCCAtgt
Downstream region at tRNA end position 
ttatgatatt
Secondary structure (Cloverleaf model)
>C10112572	Ala	TGC
                   c      Atgt ttatgatatt
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     A C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       T G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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