The detailed information of tRNA gene sequence


Sequence ID>C10112578
Genome IDCP002116
Search identical group
Phylum/ClassSpirochaetota
SpeciesSediminispirochaeta smaragdinae DSM 11293 [CP002116]
Start position on genome 2329325
End posion on genome 2329398
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cacttgttta
tRNA gene sequence 
GGGGGCGTGGCGAAGTTGGTTATCGCGCCGGCCTGTCAAGCCGGAGATCGCGGGTTCAAT
CCCCGTCGCTCCCGtaa
Downstream region at tRNA end position 
agattgtttt
Secondary structure (Cloverleaf model)
>C10112578	Asp	GTC
                   a      Gtaa agattgtttt
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          C T
                    T     T G C C C     A
      T G A        G      + | | | |     A
    T       A G C G       G C G G G     C
    G       | | | |                 T T
    G       T C G C
      T T A        G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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