The detailed information of tRNA gene sequence


Sequence ID>C10112595
Genome IDCP002116
Search identical group
Phylum/ClassSpirochaetota
SpeciesSediminispirochaeta smaragdinae DSM 11293 [CP002116]
Start position on genome 2511645
End posion on genome 2511571
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgttcaacaT
tRNA gene sequence 
GGTGGCGTAGCTCAGTTGGTAGAGCAAACGGCTCATATCCGTTCGGTCAGGGGTTCAAAT
CCCTTCGCCACTAAaa
Downstream region at tRNA end position 
ccgtatgtat
Secondary structure (Cloverleaf model)
>C10112595	Met	CAT
                   T      AAaa ccgtatgtat
                     G + T
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTC
                    A - T
                    A - T
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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