The detailed information of tRNA gene sequence


Sequence ID>C10112610
Genome IDCP002116
Search identical group
Phylum/ClassSpirochaetota
SpeciesSediminispirochaeta smaragdinae DSM 11293 [CP002116]
Start position on genome 93884
End posion on genome 93795
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtttgtattT
tRNA gene sequence 
GGAGAGGTGCGAGAGCGGCCGAATCGGGCTCCCTGCTAAGGAGTTGTACCTTAACCGGGT
ACCGGGGGTTCGAATCCCCCCCTCTCCGTtt
Downstream region at tRNA end position 
tgtatgtacc
Secondary structure (Cloverleaf model)
>C10112610	Ser	GCT
                   T      GTtt tgtatgtacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G G G G G     C
    G         | | |                 T T
    C       A T C G
      C G A        G     TGTACCTTAACCGGGTACC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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