The detailed information of tRNA gene sequence


Sequence ID>C10112873
Genome IDAP011177
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesShewanella violacea DSS12 [AP011177]
Start position on genome 4187268
End posion on genome 4187184
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
atttgattaa
tRNA gene sequence 
GCCGGTGTGGTGGAATTGGTAGACACGACGGATTCAAAATCCGTTGCTTTCGAGCGTGAC
GGTTCAAGTCCGTCCTCCGGTACCA
Downstream region at tRNA end position 
atcgaataaa
Secondary structure (Cloverleaf model)
>C10112873	Leu	CAA
                   a      ACCA atcgaataaa
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C
                     T   T
                     G - C          T G
                    T     C T G C C     A
      T A A        G      | | | | |     A
    T       G G T G       G A C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGCTTTCGAGCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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