The detailed information of tRNA gene sequence


Sequence ID>C10113615
Genome IDCP001752
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pallidum str. Chicago [CP001752]
Start position on genome 24826
End posion on genome 24738
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gctgtttttT
tRNA gene sequence 
GGAGCGGTGCGAGAGTGGTCGAATCGGGCTCCCTGCTAAGGAGTTGCATTCATCCGAGTG
CCGGGGGTTCGAATCCCCCCTGCTCCGGtt
Downstream region at tRNA end position 
tgggggccgg
Secondary structure (Cloverleaf model)
>C10113615	Ser	GCT
                   T      GGtt tgggggccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G + T
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A G C       G G G G G     C
    G         | | |                 T T
    T       A T C G
      C G A        G     TGCATTCATCCGAGTGCC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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