The detailed information of tRNA gene sequence


Sequence ID>C10113644
Genome IDCP000805
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pallidum SS14 [CP000805]
Start position on genome 1018966
End posion on genome 1019039
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ggtttcgtta
tRNA gene sequence 
GGGCAATTAGCTCAGCTGGTTAGAGTACAAGCATGACACGCTTGGGGTCACTGGTTCGAT
CCCAGTATTGCCCAgga
Downstream region at tRNA end position 
gctcctctat
Secondary structure (Cloverleaf model)
>C10113644	Val	GAC
                   a      Agga gctcctctat
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T
                     T - A          C T
                    T     T G A C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GGGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  A       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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