The detailed information of tRNA gene sequence


Sequence ID>C10114711
Genome IDCP001842
Search identical group
Phylum/ClassCyanobacteriota
SpeciesCandidatus Atelocyanobacterium thalassa isolate ALOHA [CP001842]
Start position on genome 1109736
End posion on genome 1109812
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tttttttatT
tRNA gene sequence 
GGGGAATTAGCTCAGTTGGTAGAGTGCTGCGATCGCACCGCAGAGGCCAGGAGTTCGAAT
CTCCTATTCTCCATCA
Downstream region at tRNA end position 
taattattct
Secondary structure (Cloverleaf model)
>C10114711	Ala	CGC
                   T      ATCA taattattct
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T A
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | +                 T T
    G       G A G T
      T A          G     AGGCC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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