The detailed information of tRNA gene sequence


Sequence ID>C10300002
Genome IDCP002105
Search identical group
Phylum/ClassBacillota
SpeciesAcetohalobium arabaticum DSM 5501 [CP002105]
Start position on genome 2379123
End posion on genome 2379023
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aattaaatat
tRNA gene sequence 
GGGAATGGCTGTGCCCCTGGTGGGCACCCCGGACTTCAAATCCGGCGGCGGGCCAGCCTT
GAGCTGTCCGCGGTAGGTTCGATTCCTACACATTCCCGCCA
Downstream region at tRNA end position 
aaataaatct
Secondary structure (Cloverleaf model)
>C10300002	SeC	TCA
                   t      GCCA aaataaatct
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     G - C
                     G   A          T T
                    C     C A T C C     A
      C C C        T      | | | | |     G
    T       C G T G       G T A G G     C
    G       | | | |                 T T
    G       G C A C
      T G G        C     CGGCGGGCCAGCCTTGAGCTGTCCGCG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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