The detailed information of tRNA gene sequence


Sequence ID>C10300242
Genome IDCP002116
Search identical group
Phylum/ClassSpirochaetota
SpeciesSediminispirochaeta smaragdinae DSM 11293 [CP002116]
Start position on genome 3117336
End posion on genome 3117263
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tgccagccga
tRNA gene sequence 
GGGCGGCTAGCTCAGTTGGTTAGAGCGCATGCTCGACACGCATGAGGTCACAGGTTCAAC
TCCTGTGTCGCCCAttt
Downstream region at tRNA end position 
ttgttatccc
Secondary structure (Cloverleaf model)
>C10300242	Val	GAC
                   a      Attt ttgttatccc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G + T
                     C - G          T C
                    T     T G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  T       C
                  C       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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