The detailed information of tRNA gene sequence


Sequence ID>C10500056
Genome IDCP001878
Search identical group
Phylum/ClassBacillota
SpeciesAlkalihalophilus pseudofirmus OF4 [CP001878]
Start position on genome 3771401
End posion on genome 3771497
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tatacttctt
tRNA gene sequence 
GGGGCTGGCTGCGACACTGGTGTTCGTCACGGTCTTCAAAACCGCTCGAGAGGCGCGTGC
CGTCTCTGGTAGGTTCGATTCCTACACAGTCCCGCCA
Downstream region at tRNA end position 
aattatacat
Secondary structure (Cloverleaf model)
>C10500056	SeC	TCA
                   t      GCCA aattatacat
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C
                     G   A          T T
                    C     C A T C C     A
      C A C        T      | | | | |     G
    T       A G C G       G T A G G     C
    G       | | | +                 T T
    G       T C G T
      T G T        C     TCGAGAGGCGCGTGCCGTCTCTG
                    A   C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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