The detailed information of tRNA gene sequence


Sequence ID>C10200013
Genome IDCP001220
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesComamonas thiooxydans CNB-1 [CP001220]
Start position on genome 2415900
End posion on genome 2415805
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttgactcaaa
tRNA gene sequence 
GGAAGGCAATCGTGCCCGGTGGCGCGGCCGGGCTTCAAACCCGGTGGGGGGCGTCAGCCG
CTCCCGGGTTGGTTCGACTCCAGCTGCTTTCCGCCA
Downstream region at tRNA end position 
ctccccctct
Secondary structure (Cloverleaf model)
>C10200013	SeC	TCA
                   a      GCCA ctccccctct
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     G - C
                     C - G
                     A - T          T C
                    A     C G A C C     A
      C C C        T      | + | | |     G
    G       G T G C       G T T G G     C
    G       | + | |                 T T
    T       C G C G
      G G          G     TGGGGGGCGTCAGCCGCTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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