The detailed information of tRNA gene sequence


Sequence ID>C10200033
Genome IDCP001684
Search identical group
Phylum/ClassActinomycetota
SpeciesSlackia heliotrinireducens DSM 20476 [CP001684]
Start position on genome 2801414
End posion on genome 2801319
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tctgcaattc
tRNA gene sequence 
GGAGACGGATGGGTCCTGGTGGGTCCCGCGGCCTTCAAAGCCGTTGTGAGGCGAGCAGAC
GTCTCGGGTGTGTTCGATTCGCACACGTCTCCGCCA
Downstream region at tRNA end position 
atctttcgaa
Secondary structure (Cloverleaf model)
>C10200033	SeC	TCA
                   c      GCCA atctttcgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C
                     G   A          T T
                    A     C A C G C     A
      T C C        T      | | | + |     G
    G       T G G G       G T G T G     C
    G       + + | |                 T T
    T       G T C C
      G G          C     TGTGAGGCGAGCAGACGTCTCGG
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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