The detailed information of tRNA gene sequence


Sequence ID>WENV11100005
Genome IDADVT01001083
Search identical group
Phylum/ClassFreshwater metagenome, viral RNA fraction from lake water filtrate
Species
Start position on genome 485
End posion on genome 561
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tacaataaat
tRNA gene sequence 
TGCGGGAAAGCTGAGCTGGTGCACACGGGAGTCTCATAAGCTCCATAAGGTGGGTTCGAT
TCCCACTCCCGCAACCA
Downstream region at tRNA end position 
aattcctcgg
Secondary structure (Cloverleaf model)
>WENV11100005	Met	CAT
                   t      ACCA aattcctcgg
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T T
                    A     C A C C C     A
      C G A        A      | | | | |     G
    T       G T C G       G T G G G     C
    G             |                 T T
    G       A C A C
      T G C        G     ATAAG
                    G - C
                    G - C
                    A - T
                    G - C
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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