The detailed information of tRNA gene sequence


Sequence ID>WENV11100044
Genome IDADVU01004936
Search identical group
Phylum/ClassFreshwater metagenome, viral RNA fraction from lake water filtrate
Species
Start position on genome 50
End posion on genome 121
Amino Acid Pseudo
Anticodon GCA
Upstream region at tRNA start position 
catgaagcac
tRNA gene sequence 
GGACCCATGGTCGATTGGCAAAGGCGGGGAGCTGCAACCTCCCAGGACACAGTTCGATTC
TGTGTGGGTCCTncg
Downstream region at tRNA end position 
agacatgaac
Secondary structure (Cloverleaf model)
>WENV11100044	Pseudo	GCA
                   c      Tncg agacatgaac
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     G T G T C     A
      T T A        G      | | | | |     G
    G       G C T G       C A C A G     C
    G         | + |                 T T
    C       A G G C
      A A          G     AGGA
                    G - C
                    G - C
                    G - C
                    A - T
                    G - C
                  C       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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