The detailed information of tRNA gene sequence


Sequence ID>WENV11100384
Genome IDAERA01001417
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 104
End posion on genome 180
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
acgggctcat
tRNA gene sequence 
CGGGGTGTAGCTTAGCCTGGTAGAGCGCCGCGTTCGGGACGCGGAGGCCGGAGGTTCGAA
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
ttcgatcagg
Secondary structure (Cloverleaf model)
>WENV11100384	Pro	CGG
                   t      ACCA ttcgatcagg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       T T C G       G G A G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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