The detailed information of tRNA gene sequence


Sequence ID>WENV11100420
Genome IDAERA01004256
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 2845
End posion on genome 2756
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccctcatttc
tRNA gene sequence 
GGAGGAGTGGCAGAGTGGTTGATAGCACCGGTCTTGAAAACCGGCAAGGTGTAAAAGCCT
TCGGGGGTTCGAATCCCTCCTCCTCCGCCT
Downstream region at tRNA end position 
ccgctcaccg
Secondary structure (Cloverleaf model)
>WENV11100420	Ser	TGA
                   c      GCCT ccgctcaccg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       +   | |                 T T
    T       T A G C
      T G A        A     CAAGGTGTAAAAGCCTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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